ZFAP Tutorials

How to search for anatomical terms ?

Search anatomy image
  1. On the home page menu click on "Search Anatomical Terms".
  2. Use the auto-complete tool to find the term that you want to use.
  3. Select the term from the drop down menu.
  4. Add the term to the list of search terms for by clicking on the Add term button.
  5. Search for annotated images by submitting the form.
  6. The panel at the top of the page identifies the developmental stages annotated with the search terms (red boxes) and those with no annotations (grey boxes).
  7. Click on one of the developmental stages to open up the 3D plane browser.
  8. On the top right part of the page you will find information about the search terms and gene expression data (ZFIN, Textmining).
  9. The 3D plane browser allows you to zoom in/out and move in all directions.An overview panel is available to facilitate navigation




How to use the "Gene Expression Predictor" ?

Textmining search image
  1. On the home page menu click on "Gene Expression Predictor".
  2. Use the auto-complete tool to find the term that you want to use.
  3. Select the term from the drop down menu.
  4. Add the term to the list of search terms for by clicking on the Add term button.
  5. The "predictor" searches for synonyms, plurals, and other forms of submitted keywords.
  6. You can see the distribution of genes in all article abstracts where the words have been found.
  7. Tables containing information about articles/genes are provided.
    Table headers can be clicked to sort tables in ascending or descending order.